Studies
|
56,290 |
|
Biosamples
|
195,545 |
|
Sequencing Projects
|
523,554 |
|
Analysis Projects
|
381,673 |
| Organisms | 484,046 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0326312 |
| Analysis Project Name |
Marine sediment microbial communities from North Pond in Mid-Atlantic Ridge, Atlantic Ocean - 1383E_lower re-assembly |
| Analysis Project Name Stem |
Marine sediment microbial communities from North Pond in Mid-Atlantic Ridge, Atlantic Ocean - 1383E_lower |
|
Analysis Project Name Suffix
|
re-assembly |
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
203554 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2018-12-08 |
| PI | Jerome P. Payet |
|
Analysis Project Description
|
Marine sediment microbial communities from North Pond in Mid |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
SPades v. 3.13.0 |
|
Scaffold Count
|
170087 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
226273 |
| Estimated Size |
102813702 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.16.5 |
| Added By | Jerome P. Payet on 2018-11-13 |
| Last Modified By | JGI automated process on 2022-03-06 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300032105 |
| IMG Metagenome bin count | 0 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Microbial communities from the deep biosphere |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
2 |
|
Derived Analysis Projects (DAP)
|
0 |
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