ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0321720
Analysis Project Name Prefix Escherichia coli E-78
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.20.09; SPAdes v. 3.7.1
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 62
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5216
Estimated Size 5027400
Sequencing Depth (MIGS-31.1) 273.0x
Annotation Pipeline
Added By JGI automated process on 2018-11-02
Last Modified By
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LXQH00000000 (GCA_001652805.1)
Release Date 2018-07-20
NCBI Genbank Version LXQH01
Genbank ID CM004373 (GCA_001652805.1)
Release Date 2018-07-20
NCBI Genbank Version CM004373.1
Genbank ID CM004374 (GCA_001652805.1)
Release Date 2018-07-20
NCBI Genbank Version CM004374.1
Genbank Release Date 2018-07-20
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of female urinary tract bacteria isolated using an Enhanced Quantitative Urine Culture (EQUC) protocol
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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