Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0318567 |
| Analysis Project Name |
Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
203691 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2018-11-28 |
| PI | Jennifer Pett-Ridge |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. 3.12.0 |
|
Scaffold Count
|
3370877 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
4209181 |
| Estimated Size |
1750700138 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.16.5 |
| Added By | JGI automated process on 2018-10-26 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300031821 |
| IMG Metagenome bin count |
2 |
| IMG Predicted viruses |
36 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Restricted |
|
ITS Analysis Project ID
|
1207263 (Portal) |
|
ITS Analysis Project Name
|
GRE.SIPMG.088b5f20 |
|
ITS Analysis Product Name
|
Metagenome Minimal Draft |
| ITS Version Number |
1 |
|
Library Names
|
GAAHS |
|
JGI Award DOI
|
10.46936/10.25585/60000880 |
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