ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0317876
Analysis Project Name Prefix Streptococcus sp. UMB0029
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 202715
Completion Status Complete
IMG Completion Date 2018-11-17
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 30
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2214
Estimated Size 2265449
Sequencing Depth (MIGS-31.1) 150.87x
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-10-24
Last Modified By JGI automated process on 2018-12-04
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2808606617
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID PNGD00000000 (GCA_002871495.1)
Release Date 2018-01-13
NCBI Genbank Version PNGD01
Genbank Release Date 2018-01-13
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of female urinary tract bacteria isolated using an Enhanced Quantitative Urine Culture (EQUC) protocol
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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