ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0317014
Analysis Project Name Aerococcus urinae UMB3440
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 204322
Completion Status Complete
IMG Completion Date 2018-12-05
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.9.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 19
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1941
Estimated Size 2100480
Sequencing Depth (MIGS-31.1) 168.5x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-10-20
Last Modified By JGI automated process on 2018-12-17
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2811995251
Genbank Accession
Genbank ID QMHH00000000 (GCA_003286595.1)
Release Date 2018-07-11
NCBI Genbank Version QMHH01
Genbank Release Date 2018-07-11
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of female urinary tract bacteria isolated using an Enhanced Quantitative Urine Culture (EQUC) protocol
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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