ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0317011
Analysis Project Name Aerococcus urinae UMB2325
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 204276
Completion Status Complete
IMG Completion Date 2018-12-05
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.9.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 357
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2693
Estimated Size 2619133
Sequencing Depth (MIGS-31.1) 192.49x
Genbank Anomalous Assembly Yes
Genbank Anomalous Reason contaminated
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-10-20
Last Modified By JGI automated process on 2018-12-17
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2811995205
Genbank Accession
Genbank ID QMHE00000000 (GCA_003286725.1)
Release Date 2018-07-11
NCBI Genbank Version QMHE01
Genbank Release Date 2018-07-11
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of female urinary tract bacteria isolated using an Enhanced Quantitative Urine Culture (EQUC) protocol
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?