ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0316214
Analysis Project Name Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 207797
Completion Status Complete
IMG Completion Date 2019-02-16
PI Petr Baldrian
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
Scaffold Count 279598
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 301007
Estimated Size 139053939
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-10-12
Last Modified By JGI automated process on 2022-05-25
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033545
IMG Metagenome bin count 0
IMG Predicted viruses 5
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil, plant litter and rhizosphere microbial communities from European coniferous forests
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1214058 (Portal)
ITS Analysis Project Name NRE4 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/fics.proj.2016.49499/60006010

 

 

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