ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0315305
Analysis Project Name Prefix Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 204537
Completion Status Complete
Completion Date 2018-12-10
PI David Walsh
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 583115
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 724066
Estimated Size 346405490
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-09-28
Last Modified By JGI automated process on 2019-05-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032127
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Marine microbial communities from Western Arctic Ocean, Canada
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1215444 (Portal)
ITS Analysis Project Name CB9_Tmax_529_MT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS NCBI Taxon ID
ITS Version Number

 

 

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