ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0314790
Analysis Project Name Prefix Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R4
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 211144
Completion Status Complete
IMG Completion Date 2019-11-22
PI Paul Dijkstra
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 577618
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 660342
Estimated Size 280662482
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2018-09-28
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300036404
IMG RNA-Seq ID
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
ITS Analysis Project ID 1206004 (Portal)
ITS Analysis Project Name C24R4 metaT Annotation (RiboZero)
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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