ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310832
Analysis Project Name Sorghum-adapted microbial communities enriched on wild type (WT) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - WT_Day14_9
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 201303
Completion Status Complete
IMG Completion Date 2018-10-31
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.12.0
Scaffold Count 81477
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 206776
Estimated Size 153743962
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031176
IMG Metagenome bin count 5
IMG Predicted viruses 25
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1204016 (Portal)
ITS Analysis Project Name WT_Day14_9 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
Library Names CWAXX
JGI Award DOI 10.46936/10.25585/60000909

 

 

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