ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310813
Analysis Project Name Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 203086
Completion Status Complete
IMG Completion Date 2018-11-20
PI Colin Averill
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.12.0
Scaffold Count 8231743
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 10384762
Estimated Size 4332030106
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031716
IMG Metagenome bin count 4
IMG Predicted viruses 130
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1192296 (Portal)
ITS Analysis Project Name YN3 metagenome
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001122

 

 

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