Studies
|
56,012 |
|
Biosamples
|
183,990 |
|
Sequencing Projects
|
508,091 |
|
Analysis Projects
|
381,521 |
| Organisms | 480,532 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0307831 |
| Analysis Project Name |
Dehalobacter sp. KB-1_124TCB2 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
191609 |
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
IMG Completion Date
|
2018-07-25 |
| PI | Luz Puentes Jacome |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Dehalobacter sp. KB-1_124TCB2 |
|
NCBI Taxonomy ID
|
56112 |
| Phylum | FIRMICUTES |
| Phylogeny Suggestion |
|
|
Genus
|
Dehalobacter |
| Species |
Dehalobacter sp. KB-1_124TCB2 |
| Strain |
KB-1_124TCB2 |
| Domain |
BACTERIAL |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
|
Number of tRNAs
|
|
|
tRNA Software
|
|
|
Completeness Strategy
|
|
|
Scaffold Count
|
1 |
|
Contig Count
|
|
|
Binning Method
|
k-means clusterign algorithm |
|
Binning Parameters
|
|
|
Reassembly Attempted
|
|
|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
3032 |
| Estimated Size |
3134270 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
|
| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.16.4 |
| Added By | Luz Puentes Jacome on 2018-07-06 |
| Last Modified By | JGI automated process on 2018-08-02 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2786546105 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Laboratory-enriched microbial communities from a contaminated site in Ontario, Canada - KB-1 12DCA/M_2008_UT |
| Source Analysis Project |
Laboratory-enriched microbial communities from a contaminated site in Ontario, Canada - KB-1 12DCA/M_2008_UT |
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