ANALYSIS PROJECT INFORMATION | |||
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GOLD Analysis Project ID
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Ga0304825 |
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Analysis Project Name |
Luteibacter rhizovicinus LP_13_YM |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis (Isolate) |
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IMG Submission ID
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193364 | ||
Completion Status |
Complete |
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IMG Completion Date
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2018-08-06 |
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PI | Carolin Frank | ||
Analysis Project Description
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Visibility | Public | ||
ANALYSIS PROJECT METADATA | |||
Assembly Method
(MIGS-30)
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spades v. 3.11.0 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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PhiX decontamination |
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Scaffold Count
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22 |
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Contig Count
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|
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Gene Calling Method
(MIGS-32)
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|
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Gene Count |
3911 |
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Estimated Size |
4471323 |
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Sequencing Depth
(MIGS-31.1)
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335x |
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.4.16.4 |
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Added By | JGI automated process on 2018-06-02 | ||
Last Modified By | JGI automated process on 2021-11-07 | ||
ORF Comparison Tools
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|
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PROJECT EXTERNAL REFERENCES | |||
IMG Taxon ID
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2788499832 |
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Genbank Accession
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|
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Genbank Release Date |
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ANALYSIS PROJECT COMPOSITION | |||
Study |
Above-ground endophytic microbial communities from plants in different locations in the United States |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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JGI INFORMATION | |||
JGI Data Utilization Status
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Unrestricted |
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ITS Analysis Project ID
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1193349 (Portal) |
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ITS Analysis Project Name
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Luteibactor rhizovicina LP_13_YM |
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ITS Analysis Product Name
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Microbial Minimal Draft Isolate Genome |
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ITS Version Number |
1 |
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Library Names
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CTOHB |
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JGI Award DOI
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10.46936/10.25585/60000936 |
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