ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0303343
Analysis Project Name Massilimicrobiota sp. An142
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 193712
Completion Status Complete
IMG Completion Date 2018-08-06
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) IDBA_UD v. 1.1.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 85
Contig Count 101
Gene Calling Method (MIGS-32)
Gene Count 3014
Estimated Size 2760689
Sequencing Depth (MIGS-31.1) 382x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.4
Added By JGI automated process on 2018-05-26
Last Modified By JGI automated process on 2019-07-13
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2788499997
Genbank Accession
Genbank ID NFLD00000000 (GCA_002160725.1)
Release Date 2017-06-01
NCBI Genbank Version NFLD01
Genbank Release Date 2017-06-01
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing of chicken gut anaerobes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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