ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0268658
Analysis Project Name Prefix Nocardia cyriacigeorgica MDA3732
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 201518
Completion Status Complete
IMG Completion Date 2018-11-02
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 69
Contig Count 84
Gene Calling Method (MIGS-32)
Gene Count 6037
Estimated Size 6582499
Sequencing Depth (MIGS-31.1) 172x
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-04-28
Last Modified By JGI automated process on 2018-11-13
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2806310762
IMG RNA-Seq ID
Genbank Accession
Genbank ID PSZF00000000 (GCA_002933455.1)
Release Date 2018-02-20
NCBI Genbank Version PSZF01
Assembly Accession GCA_002933455.1
Genbank Release Date 2018-02-20
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Nocardia nova and Nocardia cyriacigeorgica strains adapted to trimethoprim-sulfamethoxazole using experimental evolution
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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