Studies
|
56,335 |
|
Biosamples
|
196,965 |
|
Sequencing Projects
|
525,335 |
|
Analysis Projects
|
385,117 |
| Organisms | 484,217 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0256672 |
| Analysis Project Name |
Methanosaeta sp. BinUmb48 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
181002 |
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
IMG Completion Date
|
2018-02-21 |
| PI | Elizabeth A. Edwards |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Methanosaeta sp. BinUmb48 |
|
NCBI Taxonomy ID
|
2222 |
| Phylum | EURYARCHAEOTA |
| Phylogeny Suggestion |
Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae |
|
Genus
|
Methanosaeta |
| Species |
Methanosaeta sp. BinUmb48 |
| Strain |
BinUmb48 |
| Domain |
ARCHAEAL |
| NCBI Superkingdom |
Archaea |
| NCBI Kingdom |
|
|
Number of tRNAs
|
|
|
tRNA Software
|
|
|
Completeness Strategy
|
|
|
Scaffold Count
|
289 |
|
Contig Count
|
|
|
Binning Method
|
metabat v. 0.32.4 |
|
Binning Parameters
|
|
|
Reassembly Attempted
|
|
|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
2299 |
| Estimated Size |
2054914 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
|
| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.16.1 |
| Added By | Camilla Nesbø on 2018-02-15 |
| Last Modified By | JGI automated process on 2018-03-08 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2770939633 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Metagenomes from anaerobic digester of solid waste |
| Source Analysis Project |
Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit |
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