ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0244576
Analysis Project Name Prefix Thiopseudomonas denitrificans DSM 28679
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 180091
Completion Status Complete
IMG Completion Date 2018-02-21
PI Markus Göker
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 26
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2642
Estimated Size 2832987
Sequencing Depth (MIGS-31.1) 382x
Annotation Pipeline IMG Annotation Pipeline v.4.16.1
Added By JGI automated process on 2017-12-21
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2770939502
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID SNYK00000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the most valuable type-strain genomes for metagenomic binning, comparative biology and taxonomic classification
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1167575 (Portal)
ITS Analysis Project Name Thiopseudomonas denitrificans DSM 28679
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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