ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0228707
Analysis Project Name Prefix Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MT
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 181472
Completion Status Complete
IMG Completion Date 2018-03-02
PI Elizabeth A. Ottesen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 190551
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 229524
Estimated Size 114343059
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.1
Added By JGI automated process on 2017-11-17
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300023700
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1175517 (Portal)
ITS Analysis Project Name McNutts Creek 11-17_Aug_MT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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