ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0227278
Analysis Project Name Prefix Sunxiuqinia elliptica 114D
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 177984
Completion Status Complete
IMG Completion Date 2018-02-21
PI Regina Lamendella
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 23
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4416
Estimated Size 5350779
Sequencing Depth (MIGS-31.1) 273x
Annotation Pipeline IMG Annotation Pipeline v.4.16.0
Added By JGI automated process on 2017-11-14
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2770939440
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater and sediment microbial communities from various areas in North America, analyzing microbe dynamics in response to fracking
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1173677 (Portal)
ITS Analysis Project Name Sunxiuqinia elliptica 114D
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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