ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0225220
Analysis Project Name Candidatus Liberibacter asiaticus YCPsy
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 206326
Completion Status Complete
IMG Completion Date 2019-01-28
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) bowtie2 v. 2.2.6; Velvet v. 1.2.10
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 9
Contig Count 9
Gene Calling Method (MIGS-32)
Gene Count 1144
Estimated Size 1233647
Sequencing Depth (MIGS-31.1) 1120.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2017-11-10
Last Modified By JGI automated process on 2019-02-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2816332302
Genbank Accession
Genbank ID LIIM00000000 (GCA_001296945.1)
Release Date 2017-04-17
NCBI Genbank Version LIIM01
Genbank Release Date 2017-04-17
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Candidatus Carsonella ruddii YCCR
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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