ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208895
Analysis Project Name Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)
Analysis Project Name Stem Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 185765
Completion Status Complete
IMG Completion Date 2018-04-17
PI Frank Stewart
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 560177
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 790175
Estimated Size 379755529
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300026207
IMG Metagenome bin count 9
IMG Predicted viruses 8
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1165410 (Portal)
ITS Analysis Project Name ETNP201302SV82 metaG (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60000893

 

 

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