ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208894
Analysis Project Name Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49 (SPAdes)
Analysis Project Name Stem Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 185752
Completion Status Complete
IMG Completion Date 2018-04-17
PI Frank Stewart
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 482475
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 759783
Estimated Size 400759020
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300026200
IMG Metagenome bin count 16
IMG Predicted viruses 71
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1165409 (Portal)
ITS Analysis Project Name ETNP201306SV49 metaG (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60000893

 

 

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