ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208795
Analysis Project Name Prefix Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 184541
Completion Status Complete
IMG Completion Date 2018-04-12
PI Barbara Campbell
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 455929
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 809256
Estimated Size 345844493
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300025655
IMG Metagenome bin count 0
IMG Predicted viruses 2396
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1165310 (Portal)
ITS Analysis Project Name CB_1508_2 Viral MetaG (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 4

 

 

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