ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208783
Analysis Project Name Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)
Analysis Project Name Stem Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 184529
Completion Status Complete
IMG Completion Date 2018-04-13
PI Barbara Campbell
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 1230533
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1795930
Estimated Size 820033257
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300025872
IMG Metagenome bin count 11
IMG Predicted viruses 1358
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1165298 (Portal)
ITS Analysis Project Name DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2
Library Names APTPG
JGI Award DOI 10.46936/10.25585/60000748

 

 

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