ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208660
Analysis Project Name Prefix Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 184527
Completion Status Complete
IMG Completion Date 2018-04-12
PI Barbara Campbell
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 390562
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 570998
Estimated Size 282435334
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300025570
IMG Metagenome bin count 8
IMG Predicted viruses 857
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1165175 (Portal)
ITS Analysis Project Name DEBay_Spr_30_>0.8_DNA (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2

 

 

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