ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
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Ga0208432 |
Analysis Project Name |
Lake water microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11 (SPAdes) |
Analysis Project Name Stem |
Lake water microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11 |
Analysis Project Name Suffix
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(SPAdes) |
Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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187361 |
Completion Status |
Complete |
IMG Completion Date
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2018-05-10 |
PI | Kelly Wrighton |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.11.1 |
Scaffold Count
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392504 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
478847 |
Estimated Size |
194959502 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.4.16.2 |
Added By | JGI automated process on 2017-08-13 |
Last Modified By | JGI automated process on 2022-10-11 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300027380 |
IMG Metagenome bin count |
5 |
IMG Predicted viruses |
30 |
Genbank Accession
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Genbank Release Date |
|
SRA Runs |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Deep subsurface shale carbon reservoir microbial communities from Ohio and West Virginia, USA |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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2 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1164947 (Portal) |
ITS Analysis Project Name
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Utica-2 Time Series LW 2014_7_11 (SPAdes) |
ITS Analysis Product Name
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Metagenome Minimal Draft |
ITS Version Number |
2 |
Library Names
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ASGYB |
JGI Award DOI
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10.46936/jejc.proj.2014.48483/60005501 |
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