ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0208411
Analysis Project Name Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)
Analysis Project Name Stem Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 185793
Completion Status Complete
IMG Completion Date 2018-04-18
PI Frank Stewart
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 655446
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 959071
Estimated Size 455366210
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300026279
IMG Metagenome bin count 22
IMG Predicted viruses 183
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1164926 (Portal)
ITS Analysis Project Name ETNP2014F12-01SV261 metaG (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60000893

 

 

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