ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0197141
Analysis Project Name Prefix Sorted cell/s from freshwater from Lake Michigan, Michigan, United States - Synechococcus bacterium JGI_UCMI16048
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 139328
Completion Status Complete
IMG Completion Date 2017-07-04
PI Maureen Coleman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
Scaffold Count 54
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2236
Estimated Size 2017264
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-06-28
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300019415
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater picocyanobacteria communities from the Laurentian Great Lakes, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1150099 (Portal)
ITS Analysis Project Name Synechococcus bacterium JGI_UCMI16048
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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