ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0194129
Analysis Project Name Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 150862
Completion Status Complete
IMG Completion Date 2017-09-08
PI Katherine McMahon
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. SPAdes version: 3.10.1
Scaffold Count 1477752
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2326845
Estimated Size 1371135391
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-06-09
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300020578
IMG Metagenome bin count 40
IMG Predicted viruses 1819
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial communities from Lake Tanganyika, Tanzania
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1149210 (Portal)
ITS Analysis Project Name TA2015038 Kigoma Deep Cast 35m metaG
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000771

 

 

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