ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0194127
Analysis Project Name Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 148624
Completion Status Complete
IMG Completion Date 2017-08-30
PI Katherine McMahon
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. SPAdes version: 3.10.1
Scaffold Count 2541538
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3634525
Estimated Size 1912173096
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-06-09
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300020221
IMG Metagenome bin count 41
IMG Predicted viruses 769
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial communities from Lake Tanganyika, Tanzania
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1149206 (Portal)
ITS Analysis Project Name TA2015036 Kigoma Deep Cast 100m metaG
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000771

 

 

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