ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0187373
Analysis Project Name Prefix Flavobacteriales bacterium SCGC AG-485_G17
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 128348
Completion Status Complete
IMG Completion Date 2017-05-11
PI Frank Stewart
PI Name
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 14
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 380
Estimated Size 360583
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-05-03
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731639237
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1128183 (Portal)
ITS Analysis Project Name Flavobacteriales bacterium SCGC AG-485_G17 Screened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS Version Number 1

 

 

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