ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
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Ga0181349 |
Analysis Project Name |
Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D |
Analysis Project Name Suffix
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|
Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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130106 |
Completion Status |
Complete |
IMG Completion Date
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2017-05-13 |
PI | Vincent Denef |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MEGAHIT v. 1.0.6 |
Scaffold Count
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782973 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
1303079 |
Estimated Size |
554792855 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
Added By | JGI automated process on 2017-03-08 |
Last Modified By | JGI automated process on 2021-11-07 |
ORF Comparison Tools
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|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300017778 |
IMG Metagenome bin count |
1 |
IMG Predicted viruses |
|
Genbank Accession
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|
Genbank Release Date |
|
SRA Runs |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Freshwater lake microbial communities from the Great Lakes, USA, analyzing microbial food webs and carbon cycling |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1114506 (Portal) |
ITS Analysis Project Name
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Su13.VD.MM110.S.D |
ITS Analysis Product Name
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Metagenome Viral Standard Draft |
ITS Version Number |
1 |
JGI Award DOI
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10.46936/10.25585/60000744 |
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