Studies
|
56,015 |
|
Biosamples
|
183,990 |
|
Sequencing Projects
|
508,096 |
|
Analysis Projects
|
381,527 |
| Organisms | 480,537 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0181349 |
| Analysis Project Name |
Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
130106 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2017-05-13 |
| PI | Vincent Denef |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MEGAHIT v. 1.0.6 |
|
Scaffold Count
|
782973 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
1303079 |
| Estimated Size |
554792855 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
| Added By | JGI automated process on 2017-03-08 |
| Last Modified By | JGI automated process on 2021-11-07 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300017778 |
| IMG Metagenome bin count |
1 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Freshwater lake microbial communities from the Great Lakes, USA, analyzing microbial food webs and carbon cycling |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1114506 (Portal) |
|
ITS Analysis Project Name
|
Su13.VD.MM110.S.D |
|
ITS Analysis Product Name
|
Metagenome Viral Standard Draft |
| ITS Version Number |
1 |
|
JGI Award DOI
|
10.46936/10.25585/60000744 |
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