Studies
|
47,492 |
|
Biosamples
|
121,673 |
|
Sequencing Projects
|
389,214 |
|
Analysis Projects
|
310,441 |
| Organisms | 403,424 |
| ANALYSIS PROJECT INFORMATION | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0175177 |
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| Analysis Project Name Prefix |
Clostridium butyricum CDC_51208 |
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|
Analysis Project Name Suffix
|
|
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|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||||||||||||||
|
IMG Submission ID
|
118769 | ||||||||||||||||||
| Completion Status |
Complete |
||||||||||||||||||
|
IMG Completion Date
|
2017-03-23 |
||||||||||||||||||
| PI | |||||||||||||||||||
| PI Name |
|
||||||||||||||||||
|
Analysis Project Description
|
Submitting a public genome from NCBI/GenBank to IMG for analysis. |
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| Visibility | Public | ||||||||||||||||||
| ANALYSIS PROJECT METADATA | |||||||||||||||||||
|
Assembly Method
(MIGS-30)
|
Velvet v. 1.2.08; HGAP v. 3; Phrap SPS4.24 |
||||||||||||||||||
|
IMG Decontamination
|
Yes |
||||||||||||||||||
|
IMG Decontamination Method
|
PhiX decontamination |
||||||||||||||||||
|
Scaffold Count
|
3 |
||||||||||||||||||
|
Contig Count
|
3 |
||||||||||||||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||||||||||||||
| Gene Count |
4311 |
||||||||||||||||||
| Estimated Size |
4639914 |
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|
Sequencing Depth
(MIGS-31.1)
|
319x; 52.6x |
||||||||||||||||||
| Annotation Pipeline |
IMG Annotation Pipeline v.4.14.6 |
||||||||||||||||||
| Added By |
JGI automated process
on 2017-02-21 |
||||||||||||||||||
| Last Modified By |
JGI automated process
on 2017-11-17 |
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|
ORF Comparison Tools
|
|
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|
16S Recovered
|
|
||||||||||||||||||
|
16S Recovery Software
|
|
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| PROJECT EXTERNAL REFERENCES | |||||||||||||||||||
|
IMG Taxon ID
|
2721755758 |
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|
Genbank Accession
|
|
||||||||||||||||||
| Assembly Accession |
GCA_001886875.1 GCA_001886875.1 GCA_001886875.1 |
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| Genbank Release Date |
2016-12-03 |
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| ANALYSIS PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Clostridium butyricum CDC_51208 genome sequencing |
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|
Number of Studies
|
1 |
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Number of Projects
|
1 |
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Number of Related Analysis Projects
|
0 |
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