ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0170726
Analysis Project Name Prefix candidate division ZB3 bacterium SCGC AG-343-D04
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 113603
Completion Status Complete
IMG Completion Date 2017-02-02
PI Ramunas Stepanauskas
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 105
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1531
Estimated Size 1623535
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.14.3
Added By Eric Becraft on 2017-01-25
Last Modified By JGI automated process on 2020-05-02
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2713897483
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Bacterial and archaeal communities from various locations to study Microbial Dark Matter (Phase II)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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