ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0165252
Analysis Project Name Prefix Thioclava sp. SK-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 150144
Completion Status Complete
Completion Date 2017-09-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Platanus v. 1.2.4
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 73
Contig Count 106
Gene Calling Method (MIGS-32)
Gene Count 4135
Estimated Size 4272516
Sequencing Depth (MIGS-31.1) 126.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-12-23
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2751185743
IMG RNA-Seq ID
Genbank
Genbank ID MDHA00000000 (GCA_001705665.1)
Release Date 2016-08-17
NCBI Genbank Version MDHA01
Assembly Accession GCA_001705665.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing and assembly of bacterial isolates from the sea surface microlayer and underlying water of Aburatsubo Inlet
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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