ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0165252 |
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Analysis Project Name Prefix |
Thioclava sp. SK-1 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis (Isolate) |
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IMG Submission ID
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150144 | ||||||
Completion Status |
Complete |
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IMG Completion Date
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2017-09-11 |
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PI | |||||||
PI Name |
|
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Analysis Project Description
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Submitting a public genome from NCBI/GenBank to IMG for analysis. |
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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Platanus v. 1.2.4 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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PhiX decontamination |
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Scaffold Count
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73 |
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Contig Count
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106 |
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Gene Calling Method
(MIGS-32)
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|
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Gene Count |
4135 |
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Estimated Size |
4272516 |
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Sequencing Depth
(MIGS-31.1)
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126.0x |
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Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
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Added By |
JGI automated process
on 2016-12-23 |
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Last Modified By | |||||||
ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2751185743 |
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Genbank Accession
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|
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Assembly Accession |
GCA_001705665.1 |
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Genbank Release Date |
2016-08-17 |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
Genome sequencing and assembly of bacterial isolates from the sea surface microlayer and underlying water of Aburatsubo Inlet |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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