Studies
|
56,122 |
|
Biosamples
|
195,527 |
|
Sequencing Projects
|
519,932 |
|
Analysis Projects
|
381,637 |
| Organisms | 480,441 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0164313 |
| Analysis Project Name |
Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
113735 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2017-02-09 |
| PI | Nina Dombrowski |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MEGAHIT v. 1.0.6 |
|
Scaffold Count
|
3945535 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
5654430 |
| Estimated Size |
2743914677 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.14.3 |
| Added By | JGI automated process on 2016-12-20 |
| Last Modified By | JGI automated process on 2021-11-07 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300013101 |
| IMG Metagenome bin count |
12 |
| IMG Predicted viruses |
658 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1128596 (Portal) |
|
ITS Analysis Project Name
|
Guaymas Basin Sediment Guay4 |
|
ITS Analysis Product Name
|
Metagenome Standard Draft |
| ITS Version Number |
1 |
|
Library Names
|
BOUGA |
|
JGI Award DOI
|
10.46936/10.25585/60000737 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?
