ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0153853
Analysis Project Name Prefix Comamonas sp. JGI 000176CP_D06
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 102262
Completion Status Complete
IMG Completion Date 2016-11-22
PI Alexander Sczyrba
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 14
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 65
Estimated Size 55417
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.13.0
Added By JGI automated process on 2016-11-17
Last Modified By JGI automated process on 2019-08-28
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2706795016
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Biogas fermentation microbial communities from biogas plants in Germany
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1096831 (Portal)
ITS Analysis Project Name Comamonas sp JGI 000176CP_D06 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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