ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0151391
Analysis Project Name uncultured Deltaproteobacterium SAG2
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 99842
Completion Status Complete
IMG Completion Date 2016-11-04
PI Lara Jochum
Analysis Project Description assembled SAG from sediment
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes genome assembler v3.9.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 183
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1104
Estimated Size 1037801
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By Lara Jochum on 2016-11-01
Last Modified By JGI automated process on 2018-07-07
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2703719328
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Subseafloor sediment SAGs
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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