ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0151095
Analysis Project Name uncultured Deltaproteobacterium SAG5
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 99690
Completion Status Complete
IMG Completion Date 2016-11-04
PI Lara Jochum
Analysis Project Description Genome analysis of uncultured Deltaproteobacteria SAG5
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes genome assembler v3.9.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 111
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 868
Estimated Size 826310
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By Lara Jochum on 2016-10-28
Last Modified By JGI automated process on 2018-07-07
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2703719263
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Subseafloor sediment SAGs
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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