ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0150985
Analysis Project Name Prefix Combined assembly of Hopland grassland soil
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 99717
Completion Status Complete
IMG Completion Date 2017-04-11
PI Jennifer Pett-Ridge
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.0.6
IMG Decontamination
IMG Decontamination Method
Scaffold Count 23169384
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 28576574
Estimated Size 12333660947
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.2
Added By JGI automated process on 2016-10-27
Last Modified By JGI automated process on 2017-02-25
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300012212
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Avena fatua rhizosphere microbial communities from Hopland, California, USA
Number of Studies 1
Number of Biosamples 23
Number of Projects 23
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1116744 (Portal)
ITS Analysis Project Name Combined assembly of Hopland grassland soil
ITS Analysis Product Name Co-Assembly - Metagenome Metatranscriptome
ITS Version Number 1

 

 

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