ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0150720
Analysis Project Name Lacticaseibacillus rhamnosus 526_LRHA
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 271278
Completion Status Complete
IMG Completion Date 2022-06-17
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ABYSS v. 1.3.5
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 100
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3176
Estimated Size 3159851
Sequencing Depth (MIGS-31.1) 25x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.6
Added By JGI automated process on 2016-10-21
Last Modified By JGI automated process on 2022-06-27
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2964797265
Genbank Accession
Genbank ID JVDP00000000 (GCA_001063655.1)
Release Date 2016-07-19
NCBI Genbank Version JVDP01
Genbank Release Date 2016-07-19
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing of bacterial isolates collected over a 1-year period from the intensive care unit of University of Washington Medical Center
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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