ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0136722
Analysis Project Name Prefix Salegentibacter salegens ACAM 48
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 97783
Completion Status Complete
IMG Completion Date 2016-10-04
PI Rick Cavicchioli
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0_p5,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3620
Estimated Size 4009999
Sequencing Depth (MIGS-31.1) 234x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-08-30
Last Modified By JGI automated process on 2019-07-07
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2698536943
Genbank Accession
Genbank ID LT670848 (GCA_900142975.1)
Release Date 2017-03-18
NCBI Genbank Version LT670848
Assembly Accession GCA_900142975.1
Genbank Release Date 2017-03-18
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Saline lake microbial communities from various lakes in Antarctica
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1115181 (Portal)
ITS Analysis Project Name Salegentibacter salegens ACAM 48
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS Version Number 1

 

 

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