ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0133924
Analysis Project Name Rathayibacter tanaceti VKM Ac-2596
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 144020
Completion Status Complete
IMG Completion Date 2017-08-11
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 276
Contig Count 331
Gene Calling Method (MIGS-32)
Gene Count 3414
Estimated Size 3134990
Sequencing Depth (MIGS-31.1) 17.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-08
Last Modified By Galina Ovchinnikova on 2017-03-27
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2744054984
Genbank Accession
Genbank ID LIIN00000000 (GCA_001634385.1)
Release Date 2016-06-21
NCBI Genbank Version LIIN01
Genbank Release Date 2016-06-21
ANALYSIS PROJECT COMPOSITION
Study Rathayibacter tanaceti VKM Ac-2596 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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