ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0132440
Analysis Project Name Streptococcus pneumoniae sv. 1 D25796
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 142429
Completion Status Complete
IMG Completion Date 2017-07-31
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 64
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2188
Estimated Size 2097269
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-01
Last Modified By JGI automated process on 2017-11-21
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2740892330
Genbank Accession
Genbank ID FIVD00000000 (GCA_900050935.1)
Release Date 2016-03-14
NCBI Genbank Version FIVD01
Genbank Release Date 2016-03-14
ANALYSIS PROJECT COMPOSITION
Study Genetic diversity of Streptococcus pneumoniae strains from Malawi
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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