ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0129345
Analysis Project Name Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 94425
Completion Status Complete
IMG Completion Date 2016-09-02
PI Barbara Campbell
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. 1.0.6
Scaffold Count 3761558
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3971993
Estimated Size 1281297952
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-10
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300010297
IMG Metagenome bin count 4
IMG Predicted viruses 1138
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1110906 (Portal)
ITS Analysis Project Name CPBay_Sum_20_0.8_DNA
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000748

 

 

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