ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128995
Analysis Project Name Escherichia coli ECGM-D3374
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 129428
Completion Status Complete
IMG Completion Date 2017-05-11
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) As v. 20140521
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 117
Contig Count 143
Gene Calling Method (MIGS-32)
Gene Count 5438
Estimated Size 5359637
Sequencing Depth (MIGS-31.1) 23.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-10-03
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957954
Genbank Accession
Genbank ID LJZY00000000 (GCA_001440495.1)
Release Date 2015-11-18
NCBI Genbank Version LJZY01
Genbank Release Date 2015-11-18
ANALYSIS PROJECT COMPOSITION
Study Escherichia coli O104 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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