ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128719
Analysis Project Name Prefix Nocardia shimofusensis NBRC 100134
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 129209
Completion Status Complete
IMG Completion Date 2017-05-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) newbler v. 2.6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 70
Contig Count 75
Gene Calling Method (MIGS-32)
Gene Count 5752
Estimated Size 6327648
Sequencing Depth (MIGS-31.1) 124x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957745
Genbank Accession
Genbank ID BDBT00000000 (GCA_001613125.1)
Release Date 2016-04-01
NCBI Genbank Version BDBT01
Assembly Accession GCA_001613125.1
Genbank Release Date 2016-04-01
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Nocardia genome sequencing - National Institute of Technology and Evaluation, Japan
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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