ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128354
Analysis Project Name Prefix Methanosarcina horonobensis JCM 15518
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 90184
Completion Status Complete
IMG Completion Date 2016-07-12
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.8
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 153
Contig Count 178
Gene Calling Method (MIGS-32)
Gene Count 7259
Estimated Size 4907488
Sequencing Depth (MIGS-31.1) 24x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2017-03-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2684622506
Genbank Accession
Genbank ID BBCW00000000 (GCA_001316205.1)
Release Date 2015-10-03
NCBI Genbank Version BBCW01
Assembly Accession GCA_001316205.1
Genbank Release Date 2015-10-03
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Methanosarcina project at The University of Tokyo
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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