ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128314
Analysis Project Name Prefix Methanosarcina mazei JCM 9314
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 90194
Completion Status Complete
IMG Completion Date 2016-06-30
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.8
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 275
Contig Count 309
Gene Calling Method (MIGS-32)
Gene Count 5835
Estimated Size 4197534
Sequencing Depth (MIGS-31.1) 23x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681813026
Genbank Accession
Genbank ID BBBC00000000 (GCA_001315865.1)
Release Date 2015-10-01
NCBI Genbank Version BBBC01
Assembly Accession GCA_001315865.1
Genbank Release Date 2015-10-01
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Methanosarcina project at The University of Tokyo
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?