ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0113049
Analysis Project Name Prefix Vibrio parahaemolyticus 10-4251
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 82475
Completion Status Complete
IMG Completion Date 2016-04-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 93
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4846
Estimated Size 5190352
Sequencing Depth (MIGS-31.1) 106.0x
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238546
Genbank Accession
Genbank ID JYJS00000000 (GCA_001006105.1)
Release Date 2015-08-20
NCBI Genbank Version JYJS01
Assembly Accession GCA_001006105.1
Genbank Release Date 2015-08-20
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of clinical isolates of Vibrio parahaemolyticus
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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